Nanopublications LDF server

Matches in Nanopublications for { ?s <http://purl.org/dc/terms/abstract> ?o ?g. }

• DSP4FAIR abstract "Data Stewardship Plan (DSP) templates prompt users to consider various issues but typically have no requirements for actual implementation choices. But as FAIR methodologies mature the DSP will become a more directive “how to” manual for making data FAIR." assertion.
• DSP4FAIR abstract "Data Stewardship Plan (DSP) templates prompt users to consider various issues but typically have no requirements for actual implementation choices. But as FAIR methodologies mature the DSP will become a more directive “how to” manual for making data FAIR." assertion.
• DS-230058 abstract "Sarcasm is a linguistic phenomenon often indicating a disparity between literal and inferred meanings. Due to its complexity, it is typically difficult to discern it within an online text message. Consequently, in recent years sarcasm detection has received considerable attention from both academia and industry. Nevertheless, the majority of current approaches simply model low-level indicators of sarcasm in various machine learning algorithms. This paper aims to present sarcasm in a new light by utilizing novel indicators in a deep weighted average ensemble-based framework (DWAEF). The novel indicators pertain to exploiting the presence of simile and metaphor in text and detecting the subtle shift in tone at a sentence’s structural level. A graph neural network (GNN) structure is implemented to detect the presence of simile, bidirectional encoder representations from transformers (BERT) embeddings are exploited to detect metaphorical instances and fuzzy logic is employed to account for the shift of tone. To account for the existence of sarcasm, the DWAEF integrates the inputs from the novel indicators. The performance of the framework is evaluated on a self-curated dataset of online text messages. A comparative report between the results acquired using primitive features and those obtained using a combination of primitive features and proposed indicators is provided. The highest accuracy of 92% was achieved after applying DWAEF, the proposed framework which combines the primitive features and novel indicators together as compared to 78.58% obtained using Support Vector Machine (SVM) which was the lowest among all classifiers." assertion.
• DS-220058 abstract "Sarcasm is a linguistic phenomenon often indicating a disparity between literal and inferred meanings. Due to its complexity, it is typically difficult to discern it within an online text message. Consequently, in recent years sarcasm detection has received considerable attention from both academia and industry. Nevertheless, the majority of current approaches simply model low-level indicators of sarcasm in various machine learning algorithms. This paper aims to present sarcasm in a new light by utilizing novel indicators in a deep weighted average ensemble-based framework (DWAEF). The novel indicators pertain to exploiting the presence of simile and metaphor in text and detecting the subtle shift in tone at a sentence’s structural level. A graph neural network (GNN) structure is implemented to detect the presence of simile, bidirectional encoder representations from transformers (BERT) embeddings are exploited to detect metaphorical instances and fuzzy logic is employed to account for the shift of tone. To account for the existence of sarcasm, the DWAEF integrates the inputs from the novel indicators. The performance of the framework is evaluated on a self-curated dataset of online text messages. A comparative report between the results acquired using primitive features and those obtained using a combination of primitive features and proposed indicators is provided. The highest accuracy of 92% was achieved after applying DWAEF, the proposed framework which combines the primitive features and novel indicators together as compared to 78.58% obtained using Support Vector Machine (SVM) which was the lowest among all classifiers." assertion.
• DS-220058 abstract "Sarcasm is a linguistic phenomenon often indicating a disparity between literal and inferred meanings. Due to its complexity, it is typically difficult to discern it within an online text message. Consequently, in recent years sarcasm detection has received considerable attention from both academia and industry. Nevertheless, the majority of current approaches simply model low-level indicators of sarcasm in various machine learning algorithms. This paper aims to present sarcasm in a new light by utilizing novel indicators in a deep weighted average ensemble-based framework (DWAEF). The novel indicators pertain to exploiting the presence of simile and metaphor in text and detecting the subtle shift in tone at a sentence’s structural level. A graph neural network (GNN) structure is implemented to detect the presence of simile, bidirectional encoder representations from transformers (BERT) embeddings are exploited to detect metaphorical instances and fuzzy logic is employed to account for the shift of tone. To account for the existence of sarcasm, the DWAEF integrates the inputs from the novel indicators. The performance of the framework is evaluated on a self-curated dataset of online text messages. A comparative report between the results acquired using primitive features and those obtained using a combination of primitive features and proposed indicators is provided. The highest accuracy of 92% was achieved after applying DWAEF, the proposed framework which combines the primitive features and novel indicators together as compared to 78.58% obtained using Support Vector Machine (SVM) which was the lowest among all classifiers." assertion.
• DS-220058 abstract "Sarcasm is a linguistic phenomenon often indicating a disparity between literal and inferred meanings. Due to its complexity, it is typically difficult to discern it within an online text message. Consequently, in recent years sarcasm detection has received considerable attention from both academia and industry. Nevertheless, the majority of current approaches simply model low-level indicators of sarcasm in various machine learning algorithms. This paper aims to present sarcasm in a new light by utilizing novel indicators in a deep weighted average ensemble-based framework (DWAEF). The novel indicators pertain to exploiting the presence of simile and metaphor in text and detecting the subtle shift in tone at a sentence’s structural level. A graph neural network (GNN) structure is implemented to detect the presence of simile, bidirectional encoder representations from transformers (BERT) embeddings are exploited to detect metaphorical instances and fuzzy logic is employed to account for the shift of tone. To account for the existence of sarcasm, the DWAEF integrates the inputs from the novel indicators. The performance of the framework is evaluated on a self-curated dataset of online text messages. A comparative report between the results acquired using primitive features and those obtained using a combination of primitive features and proposed indicators is provided. The highest accuracy of 92% was achieved after applying DWAEF, the proposed framework which combines the primitive features and novel indicators together as compared to 78.58% obtained using Support Vector Machine (SVM) which was the lowest among all classifiers." assertion.
• DS-220058 abstract "Sarcasm is a linguistic phenomenon often indicating a disparity between literal and inferred meanings. Due to its complexity, it is typically difficult to discern it within an online text message. Consequently, in recent years sarcasm detection has received considerable attention from both academia and industry. Nevertheless, the majority of current approaches simply model low-level indicators of sarcasm in various machine learning algorithms. This paper aims to present sarcasm in a new light by utilizing novel indicators in a deep weighted average ensemble-based framework (DWAEF). The novel indicators pertain to exploiting the presence of simile and metaphor in text and detecting the subtle shift in tone at a sentence’s structural level. A graph neural network (GNN) structure is implemented to detect the presence of simile, bidirectional encoder representations from transformers (BERT) embeddings are exploited to detect metaphorical instances and fuzzy logic is employed to account for the shift of tone. To account for the existence of sarcasm, the DWAEF integrates the inputs from the novel indicators. The performance of the framework is evaluated on a self-curated dataset of online text messages. A comparative report between the results acquired using primitive features and those obtained using a combination of primitive features and proposed indicators is provided. The highest accuracy of 92% was achieved after applying DWAEF, the proposed framework which combines the primitive features and novel indicators together as compared to 78.58% obtained using Support Vector Machine (SVM) which was the lowest among all classifiers." assertion.
• DS-220058 abstract "Sarcasm is a linguistic phenomenon often indicating a disparity between literal and inferred meanings. Due to its complexity, it is typically difficult to discern it within an online text message. Consequently, in recent years sarcasm detection has received considerable attention from both academia and industry. Nevertheless, the majority of current approaches simply model low-level indicators of sarcasm in various machine learning algorithms. This paper aims to present sarcasm in a new light by utilizing novel indicators in a deep weighted average ensemble-based framework (DWAEF). The novel indicators pertain to exploiting the presence of simile and metaphor in text and detecting the subtle shift in tone at a sentence’s structural level. A graph neural network (GNN) structure is implemented to detect the presence of simile, bidirectional encoder representations from transformers (BERT) embeddings are exploited to detect metaphorical instances and fuzzy logic is employed to account for the shift of tone. To account for the existence of sarcasm, the DWAEF integrates the inputs from the novel indicators. The performance of the framework is evaluated on a self-curated dataset of online text messages. A comparative report between the results acquired using primitive features and those obtained using a combination of primitive features and proposed indicators is provided. The highest accuracy of 92% was achieved after applying DWAEF, the proposed framework which combines the primitive features and novel indicators together as compared to 78.58% obtained using Support Vector Machine (SVM) which was the lowest among all classifiers." assertion.
• access.2023.3269660 abstract "Topic modeling comprises a set of machine learning algorithms that allow topics to be extracted from a collection of documents. These algorithms have been widely used in many areas, such as identifying dominant topics in scientific research. However, works addressing such problems focus on identifying static topics, providing snapshots that cannot show how those topics evolve. Aiming to close this gap, in this article, we describe an approach for dynamic article set analysis and classification. This is accomplished by querying open data of notable scientific databases via representational state transfers. After that, we enforce data management practices with a dynamic topic modeling approach on the associated metadata available. As a result, we identify research trends for a given field at specific instants and the referred terminology trends evolution throughout the years. It was possible to detect the associated lexical variation over time in published content, ultimately determining the so-called “hot topics” in arbitrary instants and how they correlate." assertion.
• access.2023.3269660 abstract "Topic modeling comprises a set of machine learning algorithms that allow topics to be extracted from a collection of documents. These algorithms have been widely used in many areas, such as identifying dominant topics in scientific research. However, works addressing such problems focus on identifying static topics, providing snapshots that cannot show how those topics evolve. Aiming to close this gap, in this article, we describe an approach for dynamic article set analysis and classification. This is accomplished by querying open data of notable scientific databases via representational state transfers. After that, we enforce data management practices with a dynamic topic modeling approach on the associated metadata available. As a result, we identify research trends for a given field at specific instants and the referred terminology trends evolution throughout the years. It was possible to detect the associated lexical variation over time in published content, ultimately determining the so-called “hot topics” in arbitrary instants and how they correlate." assertion.
• gigabyte.99 abstract "In China, 65 types of venomous snakes exist, with the Chinese Cobra Naja atra being prominent and a major cause of snakebites in humans. Furthermore, N. atra is a protected animal in some areas, as it has been listed as vulnerable by the International Union for Conservation of Nature. Recently, due to the medical value of snake venoms, venomics has experienced growing research interest. In particular, genomic resources are crucial for understanding the molecular mechanisms of venom production. Here, we report a highly continuous genome assembly of N. atra, based on a snake sample from Huangshan, Anhui, China. The size of this genome is 1.67 Gb, while its repeat content constitutes 37.8% of the genome. A total of 26,432 functional genes were annotated. This data provides an essential resource for studying venom production in N. atra. It may also provide guidance for the protection of this species." assertion.
• DS-230059 abstract "Measuring data drift is essential in machine learning applications where model scoring (evaluation) is done on data samples that differ from those used in training. The Kullback-Leibler divergence is a common measure of shifted probability distributions, for which discretized versions are invented to deal with binned or categorical data. We present the Unstable Population Indicator, a robust, flexible and numerically stable, discretized implementation of Jeffrey's divergence, along with an implementation in a Python package that can deal with continuous, discrete, ordinal and nominal data in a variety of popular data types. We show the numerical and statistical properties in controlled experiments. It is not advised to employ a common cut-off to distinguish stable from unstable populations, but rather to let that cut-off depend on the use case." assertion.
• DS-240059 abstract "Measuring data drift is essential in machine learning applications where model scoring (evaluation) is done on data samples that differ from those used in training. The Kullback-Leibler divergence is a common measure of shifted probability distributions, for which discretized versions are invented to deal with binned or categorical data. We present the Unstable Population Indicator, a robust, flexible and numerically stable, discretized implementation of Jeffrey's divergence, along with an implementation in a Python package that can deal with continuous, discrete, ordinal and nominal data in a variety of popular data types. We show the numerical and statistical properties in controlled experiments. It is not advised to employ a common cut-off to distinguish stable from unstable populations, but rather to let that cut-off depend on the use case." assertion.
• DS-240059 abstract "Measuring data drift is essential in machine learning applications where model scoring (evaluation) is done on data samples that differ from those used in training. The Kullback-Leibler divergence is a common measure of shifted probability distributions, for which discretized versions are invented to deal with binned or categorical data. We present the Unstable Population Indicator, a robust, flexible and numerically stable, discretized implementation of Jeffrey's divergence, along with an implementation in a Python package that can deal with continuous, discrete, ordinal and nominal data in a variety of popular data types. We show the numerical and statistical properties in controlled experiments. It is not advised to employ a common cut-off to distinguish stable from unstable populations, but rather to let that cut-off depend on the use case." assertion.
• DS-240059 abstract "Measuring data drift is essential in machine learning applications where model scoring (evaluation) is done on data samples that differ from those used in training. The Kullback-Leibler divergence is a common measure of shifted probability distributions, for which discretized versions are invented to deal with binned or categorical data. We present the Unstable Population Indicator, a robust, flexible and numerically stable, discretized implementation of Jeffrey's divergence, along with an implementation in a Python package that can deal with continuous, discrete, ordinal and nominal data in a variety of popular data types. We show the numerical and statistical properties in controlled experiments. It is not advised to employ a common cut-off to distinguish stable from unstable populations, but rather to let that cut-off depend on the use case." assertion.
• DS-240059 abstract "Measuring data drift is essential in machine learning applications where model scoring (evaluation) is done on data samples that differ from those used in training. The Kullback-Leibler divergence is a common measure of shifted probability distributions, for which discretized versions are invented to deal with binned or categorical data. We present the Unstable Population Indicator, a robust, flexible and numerically stable, discretized implementation of Jeffrey's divergence, along with an implementation in a Python package that can deal with continuous, discrete, ordinal and nominal data in a variety of popular data types. We show the numerical and statistical properties in controlled experiments. It is not advised to employ a common cut-off to distinguish stable from unstable populations, but rather to let that cut-off depend on the use case." assertion.
• DS-240059 abstract "Measuring data drift is essential in machine learning applications where model scoring (evaluation) is done on data samples that differ from those used in training. The Kullback-Leibler divergence is a common measure of shifted probability distributions, for which discretized versions are invented to deal with binned or categorical data. We present the Unstable Population Indicator, a robust, flexible and numerically stable, discretized implementation of Jeffrey's divergence, along with an implementation in a Python package that can deal with continuous, discrete, ordinal and nominal data in a variety of popular data types. We show the numerical and statistical properties in controlled experiments. It is not advised to employ a common cut-off to distinguish stable from unstable populations, but rather to let that cut-off depend on the use case." assertion.
• DS-240059 abstract "Measuring data drift is essential in machine learning applications where model scoring (evaluation) is done on data samples that differ from those used in training. The Kullback-Leibler divergence is a common measure of shifted probability distributions, for which discretized versions are invented to deal with binned or categorical data. We present the Unstable Population Indicator, a robust, flexible and numerically stable, discretized implementation of Jeffrey's divergence, along with an implementation in a Python package that can deal with continuous, discrete, ordinal and nominal data in a variety of popular data types. We show the numerical and statistical properties in controlled experiments. It is not advised to employ a common cut-off to distinguish stable from unstable populations, but rather to let that cut-off depend on the use case." assertion.
• DS-240063 abstract "Stable states in complex systems correspond to local minima on the associated potential energy surface. Transitions between these local minima govern the dynamics of such systems. Precisely determining the transition pathways in complex and high-dimensional systems is challenging because these transitions are rare events, and isolating the relevant species in experiments is difficult. Most of the time, the system remains near a local minimum, with rare, large fluctuations leading to transitions between minima. The probability of such transitions decreases exponentially with the height of the energy barrier, making the system's dynamics highly sensitive to the calculated energy barriers. This work aims to formulate the problem of finding the minimum energy barrier between two stable states in the system's state space as a cost-minimization problem. It is proposed to solve this problem using reinforcement learning algorithms. The exploratory nature of reinforcement learning agents enables efficient sampling and determination of the minimum energy barrier for transitions." assertion.
• DS-240063 abstract "Stable states in complex systems correspond to local minima on the associated potential energy surface. Transitions between these local minima govern the dynamics of such systems. Precisely determining the transition pathways in complex and high-dimensional systems is challenging because these transitions are rare events, and isolating the relevant species in experiments is difficult. Most of the time, the system remains near a local minimum, with rare, large fluctuations leading to transitions between minima. The probability of such transitions decreases exponentially with the height of the energy barrier, making the system's dynamics highly sensitive to the calculated energy barriers. This work aims to formulate the problem of finding the minimum energy barrier between two stable states in the system's state space as a cost-minimization problem. It is proposed to solve this problem using reinforcement learning algorithms. The exploratory nature of reinforcement learning agents enables efficient sampling and determination of the minimum energy barrier for transitions." assertion.
• DS-170010 abstract "Various approaches and systems have been presented in the context of scholarly communication for what has been called semantic publishing. Closer inspection, however, reveals that these approaches are mostly not about publishing semantic representations, as the name seems to suggest. Rather, they take the processes and outcomes of the current narrative-based publishing system for granted and only work with already published papers. This includes approaches involving semantic annotations, semantic interlinking, semantic integration, and semantic discovery, but with the semantics coming into play only after the publication of the original article. While these are interesting and important approaches, they fall short of providing a vision to transcend the current publishing paradigm. We argue here for taking the term semantic publishing literally and work towards a vision of genuine semantic publishing, where computational tools and algorithms can help us with dealing with the wealth of human knowledge by letting researchers capture their research results with formal semantics from the start, as integral components of their publications. We argue that these semantic components should furthermore cover at least the main claims of the work, that they should originate from the authors themselves, and that they should be fine-grained and light-weight for optimized re-usability and minimized publication overhead. This paper is in fact not just advocating our concept, but is itself a genuine semantic publication, thereby demonstrating and illustrating our points." assertion.
• DS-170010 abstract "Various approaches and systems have been presented in the context of scholarly communication for what has been called semantic publishing. Closer inspection, however, reveals that these approaches are mostly not about publishing semantic representations, as the name seems to suggest. Rather, they take the processes and outcomes of the current narrative-based publishing system for granted and only work with already published papers. This includes approaches involving semantic annotations, semantic interlinking, semantic integration, and semantic discovery, but with the semantics coming into play only after the publication of the original article. While these are interesting and important approaches, they fall short of providing a vision to transcend the current publishing paradigm. We argue here for taking the term semantic publishing literally and work towards a vision of genuine semantic publishing, where computational tools and algorithms can help us with dealing with the wealth of human knowledge by letting researchers capture their research results with formal semantics from the start, as integral components of their publications. We argue that these semantic components should furthermore cover at least the main claims of the work, that they should originate from the authors themselves, and that they should be fine-grained and light-weight for optimized re-usability and minimized publication overhead. This paper is in fact not just advocating our concept, but is itself a genuine semantic publication, thereby demonstrating and illustrating our points." assertion.
• DS-170010 abstract "Various approaches and systems have been presented in the context of scholarly communication for what has been called semantic publishing. Closer inspection, however, reveals that these approaches are mostly not about publishing semantic representations, as the name seems to suggest. Rather, they take the processes and outcomes of the current narrative-based publishing system for granted and only work with already published papers. This includes approaches involving semantic annotations, semantic interlinking, semantic integration, and semantic discovery, but with the semantics coming into play only after the publication of the original article. While these are interesting and important approaches, they fall short of providing a vision to transcend the current publishing paradigm. We argue here for taking the term semantic publishing literally and work towards a vision of genuine semantic publishing, where computational tools and algorithms can help us with dealing with the wealth of human knowledge by letting researchers capture their research results with formal semantics from the start, as integral components of their publications. We argue that these semantic components should furthermore cover at least the main claims of the work, that they should originate from the authors themselves, and that they should be fine-grained and light-weight for optimized re-usability and minimized publication overhead. This paper is in fact not just advocating our concept, but is itself a genuine semantic publication, thereby demonstrating and illustrating our points." assertion.
• DS-170010 abstract "Various approaches and systems have been presented in the context of scholarly communication for what has been called semantic publishing. Closer inspection, however, reveals that these approaches are mostly not about publishing semantic representations, as the name seems to suggest. Rather, they take the processes and outcomes of the current narrative-based publishing system for granted and only work with already published papers. This includes approaches involving semantic annotations, semantic interlinking, semantic integration, and semantic discovery, but with the semantics coming into play only after the publication of the original article. While these are interesting and important approaches, they fall short of providing a vision to transcend the current publishing paradigm. We argue here for taking the term semantic publishing literally and work towards a vision of genuine semantic publishing, where computational tools and algorithms can help us with dealing with the wealth of human knowledge by letting researchers capture their research results with formal semantics from the start, as integral components of their publications. We argue that these semantic components should furthermore cover at least the main claims of the work, that they should originate from the authors themselves, and that they should be fine-grained and light-weight for optimized re-usability and minimized publication overhead. This paper is in fact not just advocating our concept, but is itself a genuine semantic publication, thereby demonstrating and illustrating our points." assertion.
• DS-170010 abstract "Various approaches and systems have been presented in the context of scholarly communication for what has been called semantic publishing. Closer inspection, however, reveals that these approaches are mostly not about publishing semantic representations, as the name seems to suggest. Rather, they take the processes and outcomes of the current narrative-based publishing system for granted and only work with already published papers. This includes approaches involving semantic annotations, semantic interlinking, semantic integration, and semantic discovery, but with the semantics coming into play only after the publication of the original article. While these are interesting and important approaches, they fall short of providing a vision to transcend the current publishing paradigm. We argue here for taking the term semantic publishing literally and work towards a vision of genuine semantic publishing, where computational tools and algorithms can help us with dealing with the wealth of human knowledge by letting researchers capture their research results with formal semantics from the start, as integral components of their publications. We argue that these semantic components should furthermore cover at least the main claims of the work, that they should originate from the authors themselves, and that they should be fine-grained and light-weight for optimized re-usability and minimized publication overhead. This paper is in fact not just advocating our concept, but is itself a genuine semantic publication, thereby demonstrating and illustrating our points." assertion.
• DS-170010 abstract "Various approaches and systems have been presented in the context of scholarly communication for what has been called semantic publishing. Closer inspection, however, reveals that these approaches are mostly not about publishing semantic representations, as the name seems to suggest. Rather, they take the processes and outcomes of the current narrative-based publishing system for granted and only work with already published papers. This includes approaches involving semantic annotations, semantic interlinking, semantic integration, and semantic discovery, but with the semantics coming into play only after the publication of the original article. While these are interesting and important approaches, they fall short of providing a vision to transcend the current publishing paradigm. We argue here for taking the term semantic publishing literally and work towards a vision of genuine semantic publishing, where computational tools and algorithms can help us with dealing with the wealth of human knowledge by letting researchers capture their research results with formal semantics from the start, as integral components of their publications. We argue that these semantic components should furthermore cover at least the main claims of the work, that they should originate from the authors themselves, and that they should be fine-grained and light-weight for optimized re-usability and minimized publication overhead. This paper is in fact not just advocating our concept, but is itself a genuine semantic publication, thereby demonstrating and illustrating our points." assertion.